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Systematic Finding Novel Translation Factors in Pyrococcus furiosus

Xiaojing Zhang
Graduate School of Media and Goernance
Keio University
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Abstract:

We have systematically screened the protein expression library from hyperthermophilic archaeon Pyrococcus furiosus (P. furiosus) using a multi-structure oligo to search for novel RNA-binding proteins and found 21 RNA-binding protein candidates. The protein pool No.658, one of the 21 candidates, exhibits the RNA-binding activity. The PF1684 gene, which is contained in the insert of the No.658 plasmid, is responsible for this RNA-binding activity. PF1684-encoded protein is composed of a 249 amino acid residues, which was purified to near homogeneity as a 28kDa polypeptide. Homology search indicates it is acetylglutamate kinase. Our experiments suggest that 55$ ^\circ$ C is the optimal temperature for its RNA-binding activity; this activity is ATP independent; and the binding strength is related with temperature.





Xiaojing Zhang (Lucy) 2005-02-06